Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bax inhibitor-1 family protein | LPB072_RS13900 | Not Available | Positive | 3026678 - 3027370 | 24314.7 |
| hypothetical protein | LPB072_RS13905 | Not Available | Positive | 3027499 - 3027858 | 12605.9 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | LPB072_RS13910 | Not Available | Negative | 3027876 - 3029336 | 53626.5 |
| 3'-5' exonuclease | LPB072_RS13915 | Not Available | Negative | 3029378 - 3030163 | 30067.5 |
| peptidoglycan dd-metalloendopeptidase family protein | LPB072_RS13920 | Not Available | Negative | 3030181 - 3031098 | 31728.1 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | LPB072_RS13925 | Not Available | Negative | 3031186 - 3031947 | 26804.8 |
| 5'/3'-nucleotidase sure | LPB072_RS13930 | Not Available | Negative | 3032028 - 3032819 | 27997.1 |
| nadph:quinone oxidoreductase family protein | LPB072_RS13935 | Not Available | Positive | 3032977 - 3033963 | 34585.3 |
| acyclic terpene utilization atua family protein | LPB072_RS13940 | Not Available | Positive | 3034055 - 3035860 | 63009.1 |
| enoyl-coa hydratase/isomerase family protein | LPB072_RS13945 | Not Available | Positive | 3035889 - 3036713 | 29220.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
