Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hsp33 family molecular chaperone hslo | LPB072_RS13850 | Not Available | Negative | 3015501 - 3016481 | 35693.6 |
| gamma carbonic anhydrase family protein | LPB072_RS13855 | Not Available | Negative | 3016520 - 3017044 | 18327.2 |
| ferritin-like domain-containing protein | LPB072_RS13860 | Not Available | Positive | 3017138 - 3018010 | 31821.2 |
| hypothetical protein | LPB072_RS13865 | Not Available | Positive | 3018085 - 3019125 | 38755.3 |
| sulfatase | LPB072_RS13870 | Not Available | Negative | 3019182 - 3020486 | 48759.7 |
| trap transporter permease | LPB072_RS13875 | Not Available | Negative | 3020517 - 3022448 | 66689.8 |
| taxi family trap transporter solute-binding subunit | LPB072_RS13880 | Not Available | Negative | 3022521 - 3023510 | 35026.4 |
| lysr family transcriptional regulator | LPB072_RS13885 | Not Available | Positive | 3023624 - 3024535 | 32951.3 |
| atp-dependent rna helicase dbpa | LPB072_RS13890 | Not Available | Positive | 3024585 - 3025979 | 50576.1 |
| glcg/hbps family heme-binding protein | LPB072_RS13895 | Not Available | Negative | 3026004 - 3026411 | 13912.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
