Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | LPB072_RS01345 | Not Available | Positive | 272915 - 273682 | 28467.7 |
| sugar phosphate isomerase/epimerase family protein | LPB072_RS01350 | Not Available | Positive | 273689 - 274450 | 27336.7 |
| sugar kinase | LPB072_RS01355 | Not Available | Positive | 274447 - 275385 | 32647.9 |
| 2-hydroxyacid dehydrogenase | LPB072_RS01360 | Not Available | Positive | 275382 - 276344 | 34715.9 |
| fmn-dependent nadh-azoreductase | LPB072_RS01365 | Not Available | Negative | 276420 - 277040 | 22002.2 |
| lysr substrate-binding domain-containing protein | LPB072_RS01370 | Not Available | Positive | 277161 - 278087 | 33407.8 |
| atp-binding protein | LPB072_RS01375 | Not Available | Negative | 278183 - 280591 | 89312.7 |
| threonine ammonia-lyase | LPB072_RS01380 | Not Available | Positive | 280815 - 282014 | 42613.1 |
| mechanosensitive ion channel | LPB072_RS01385 | Not Available | Positive | 282365 - 283825 | 50822.5 |
| paai family thioesterase | LPB072_RS01390 | Not Available | Positive | 283854 - 284279 | 14976.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
