Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LPB072_RS13700 | Not Available | Negative | 2986120 - 2986722 | 21653.5 |
| hypothetical protein | LPB072_RS13705 | Not Available | Negative | 2987051 - 2987455 | 15426.7 |
| marr family winged helix-turn-helix transcriptional regulator | LPB072_RS13710 | Not Available | Negative | 2987589 - 2988020 | 15224.5 |
| giy-yig nuclease family protein | LPB072_RS13715 | Not Available | Negative | 2988017 - 2988382 | 13524.8 |
| c-type cytochrome | LPB072_RS13720 | Not Available | Negative | 2988748 - 2989053 | 10751.9 |
| pqq-dependent methanol/ethanol family dehydrogenase | LPB072_RS13725 | Not Available | Negative | 2989243 - 2990934 | 60615.8 |
| quinoprotein relay system zinc metallohydrolase 1 | LPB072_RS13730 | Not Available | Negative | 2991328 - 2992308 | 35762.2 |
| quinoprotein dehydrogenase-associated soxyz-like carrier | LPB072_RS13735 | Not Available | Negative | 2992305 - 2993105 | 29160.0 |
| abc transporter permease | LPB072_RS13740 | Not Available | Negative | 2993143 - 2993985 | 31137.2 |
| abc transporter substrate-binding protein | LPB072_RS13745 | Not Available | Negative | 2993967 - 2995262 | 46298.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
