Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LPB072_RS13310 | Not Available | Negative | 2904524 - 2904817 | 10959.4 |
| fixh family protein | LPB072_RS13315 | Not Available | Negative | 2904864 - 2905151 | 10238.5 |
| cytochrome c oxidase accessory protein ccog | LPB072_RS13320 | Not Available | Negative | 2905183 - 2906556 | 51410.9 |
| cytochrome-c oxidase, cbb3-type subunit iii | LPB072_RS13325 | Not Available | Negative | 2906704 - 2907618 | 32478.7 |
| cbb3-type cytochrome oxidase subunit 3 | LPB072_RS13330 | Not Available | Negative | 2907646 - 2907783 | 5070.0 |
| cytochrome-c oxidase, cbb3-type subunit ii | LPB072_RS13335 | Not Available | Negative | 2907795 - 2908484 | 25260.2 |
| cytochrome-c oxidase, cbb3-type subunit i | LPB072_RS13340 | Not Available | Negative | 2908496 - 2909941 | 54163.0 |
| cbb3-type cytochrome oxidase assembly protein ccos | LPB072_RS13345 | Not Available | Negative | 2910010 - 2910147 | 5177.41 |
| heavy metal translocating p-type atpase | LPB072_RS13350 | Not Available | Negative | 2910185 - 2912581 | 85227.3 |
| universal stress protein | LPB072_RS13355 | Not Available | Positive | 2912694 - 2913137 | 16004.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
