Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l20 | LPB072_RS13260 | Not Available | Negative | 2894564 - 2894923 | 13395.7 |
| 50s ribosomal protein l35 | LPB072_RS13265 | Not Available | Negative | 2894948 - 2895151 | 7577.62 |
| translation initiation factor if-3 | LPB072_RS13270 | Not Available | Negative | 2895345 - 2895881 | 19708.9 |
| threonine--trna ligase | LPB072_RS13275 | Not Available | Negative | 2896066 - 2897973 | 71823.6 |
| duf4189 domain-containing protein | LPB072_RS13280 | Not Available | Negative | 2898225 - 2898611 | 12683.8 |
| isocitrate lyase | LPB072_RS13285 | Not Available | Negative | 2898818 - 2900149 | 48663.3 |
| dmt family transporter | LPB072_RS13290 | Not Available | Positive | 2900473 - 2901426 | 34006.8 |
| sulfite exporter taue/safe family protein | LPB072_RS13295 | Not Available | Negative | 2901439 - 2902110 | 23231.0 |
| oxygen-independent coproporphyrinogen iii oxidase | LPB072_RS13300 | Not Available | Negative | 2902170 - 2903591 | 53059.8 |
| fumarate/nitrate reduction transcriptional regulator fnr | LPB072_RS13305 | Not Available | Positive | 2903728 - 2904447 | 27002.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
