Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly transcriptional regulator iscr | LPB072_RS13205 | Not Available | Negative | 2882990 - 2883523 | 19021.1 |
| excinuclease abc subunit uvrb | LPB072_RS13215 | Not Available | Negative | 2883729 - 2885837 | 79530.3 |
| amino acid aminotransferase | LPB072_RS13220 | Not Available | Positive | 2885956 - 2887164 | 43007.9 |
| polyhydroxyalkanoate depolymerase | LPB072_RS13225 | Not Available | Positive | 2887430 - 2888902 | 54708.4 |
| barstar family protein | LPB072_RS13230 | Not Available | Positive | 2888963 - 2889624 | 23915.2 |
| Trna-pro | Not Available | Not Available | Positive | 2889690 - 2889766 | Not Available |
| merr family transcriptional regulator | LPB072_RS13240 | Not Available | Negative | 2889803 - 2890264 | 17266.9 |
| integration host factor subunit alpha | LPB072_RS13245 | Not Available | Negative | 2890428 - 2890763 | 12083.5 |
| phenylalanine--trna ligase subunit beta | LPB072_RS13250 | Not Available | Negative | 2890791 - 2893220 | 87848.7 |
| phenylalanine--trna ligase subunit alpha | LPB072_RS13255 | Not Available | Negative | 2893351 - 2894424 | 39588.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
