Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 2875043 - 2875132 | Not Available |
| magnesium transporter | LPB072_RS13160 | Not Available | Negative | 2875211 - 2876854 | 59250.5 |
| Trna-val | Not Available | Not Available | Positive | 2877062 - 2877136 | Not Available |
| dna polymerase iii subunit epsilon | LPB072_RS13170 | Not Available | Negative | 2877237 - 2877944 | 25777.7 |
| isc system 2fe-2s type ferredoxin | LPB072_RS13175 | Not Available | Negative | 2877952 - 2878290 | 12215.5 |
| fe-s protein assembly chaperone hsca | LPB072_RS13180 | Not Available | Negative | 2878328 - 2880205 | 65852.1 |
| fe-s protein assembly co-chaperone hscb | LPB072_RS13185 | Not Available | Negative | 2880242 - 2880766 | 19752.2 |
| iron-sulfur cluster assembly protein isca | LPB072_RS13190 | Not Available | Negative | 2880870 - 2881193 | 11790.0 |
| fe-s cluster assembly scaffold iscu | LPB072_RS13195 | Not Available | Negative | 2881315 - 2881701 | 13632.2 |
| iscs subfamily cysteine desulfurase | LPB072_RS13200 | Not Available | Negative | 2881714 - 2882931 | 44928.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
