Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/isomerase family protein | LPB072_RS13045 | Not Available | Negative | 2850683 - 2851789 | 40457.5 |
| dmt family transporter | LPB072_RS13050 | Not Available | Negative | 2851819 - 2852901 | 38785.1 |
| translational gtpase typa | LPB072_RS13055 | Not Available | Negative | 2852946 - 2854769 | 66969.3 |
| trna pseudouridine(55) synthase trub | LPB072_RS13060 | Not Available | Negative | 2854766 - 2855755 | 35712.9 |
| 30s ribosome-binding factor rbfa | LPB072_RS13065 | Not Available | Negative | 2855758 - 2856132 | 13756.4 |
| signal peptidase i | LPB072_RS13070 | Not Available | Negative | 2856136 - 2856822 | 25905.2 |
| translation initiation factor if-2 | LPB072_RS13075 | Not Available | Negative | 2856843 - 2859692 | 101782.0 |
| transcription termination factor nusa | LPB072_RS13080 | Not Available | Negative | 2859725 - 2861224 | 55280.8 |
| ribosome maturation factor rimp | LPB072_RS13085 | Not Available | Negative | 2861303 - 2861896 | 21873.2 |
| duf2788 domain-containing protein | LPB072_RS13090 | Not Available | Negative | 2862068 - 2862289 | 7973.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
