Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mota/tolq/exbb proton channel family protein | LPB072_RS12940 | Not Available | Positive | 2832705 - 2833340 | 22532.8 |
| exbd/tolr family protein | LPB072_RS12945 | Not Available | Positive | 2833351 - 2833788 | 15638.8 |
| tetraacyldisaccharide 4'-kinase | LPB072_RS12950 | Not Available | Positive | 2833808 - 2834884 | 38734.7 |
| trm112 family protein | LPB072_RS12955 | Not Available | Positive | 2834918 - 2835124 | 7569.12 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | LPB072_RS12960 | Not Available | Positive | 2835121 - 2835897 | 27826.6 |
| adenylate kinase | LPB072_RS12965 | Not Available | Positive | 2836054 - 2836710 | 23628.4 |
| asparaginase | LPB072_RS12970 | Not Available | Negative | 2836771 - 2837757 | 33878.6 |
| transcriptional repressor lexa | LPB072_RS12975 | Not Available | Positive | 2837881 - 2838567 | 25170.4 |
| hypothetical protein | LPB072_RS23485 | Not Available | Positive | 2838747 - 2839121 | 13732.4 |
| d-2-hydroxyacid dehydrogenase family protein | LPB072_RS12985 | Not Available | Positive | 2839301 - 2840308 | 36769.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
