Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase hera-like c-terminal domain-containing protein | LPB072_RS12890 | Not Available | Positive | 2820032 - 2821573 | 55180.9 |
| duf1499 domain-containing protein | LPB072_RS12895 | Not Available | Positive | 2821588 - 2822073 | 17690.7 |
| sgnh/gdsl hydrolase family protein | LPB072_RS12900 | Not Available | Positive | 2822070 - 2822903 | 28452.2 |
| atp-dependent clp protease atp-binding subunit clpa | LPB072_RS12905 | Not Available | Negative | 2822969 - 2825311 | 85693.2 |
| atp-dependent clp protease adapter clps | LPB072_RS12910 | Not Available | Negative | 2825405 - 2825770 | 13628.5 |
| nadp-dependent isocitrate dehydrogenase | LPB072_RS12915 | Not Available | Negative | 2826028 - 2827281 | 45744.2 |
| duf192 domain-containing protein | LPB072_RS12920 | Not Available | Positive | 2827388 - 2827837 | 16628.5 |
| nadp-dependent isocitrate dehydrogenase | LPB072_RS12925 | Not Available | Negative | 2827890 - 2830130 | 82238.2 |
| superoxide dismutase | LPB072_RS12930 | Not Available | Negative | 2830384 - 2830965 | 21209.9 |
| exodeoxyribonuclease vii large subunit | LPB072_RS12935 | Not Available | Negative | 2831060 - 2832367 | 47117.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
