Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a export permease/atp-binding protein msba | LPB072_RS12840 | Not Available | Positive | 2809337 - 2811154 | 65807.4 |
| outer membrane beta-barrel protein | LPB072_RS12845 | Not Available | Negative | 2811360 - 2812406 | 36056.4 |
| rne/rng family ribonuclease | LPB072_RS12850 | Not Available | Negative | 2812608 - 2814170 | 57557.2 |
| maf family protein | LPB072_RS12855 | Not Available | Negative | 2814208 - 2814828 | 22050.7 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | LPB072_RS12860 | Not Available | Negative | 2815015 - 2815482 | 17533.3 |
| ribosome silencing factor | LPB072_RS12865 | Not Available | Negative | 2815479 - 2816210 | 25683.6 |
| nicotinate (nicotinamide) nucleotide adenylyltransferase | LPB072_RS12870 | Not Available | Negative | 2816207 - 2816878 | 23999.8 |
| oxygen-dependent coproporphyrinogen oxidase | LPB072_RS12875 | Not Available | Negative | 2816890 - 2817804 | 34351.0 |
| phosphoribosylamine--glycine ligase | LPB072_RS12880 | Not Available | Negative | 2817820 - 2819097 | 44585.8 |
| yebc/pmpr family dna-binding transcriptional regulator | LPB072_RS12885 | Not Available | Negative | 2819229 - 2819948 | 26028.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
