Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (2fe-2s)-binding protein | LPB072_RS12640 | Not Available | Negative | 2757789 - 2758250 | 16279.7 |
| nad-dependent dna ligase liga | LPB072_RS12645 | Not Available | Negative | 2758434 - 2760509 | 74997.5 |
| cell division protein zipa c-terminal ftsz-binding domain-containing protein | LPB072_RS12650 | Not Available | Negative | 2760644 - 2761873 | 42827.2 |
| chromosome segregation protein smc | LPB072_RS12655 | Not Available | Negative | 2761905 - 2765429 | 129738.0 |
| mhyt domain-containing protein | LPB072_RS12660 | Not Available | Positive | 2765902 - 2766669 | 26828.5 |
| succinyldiaminopimelate transaminase | LPB072_RS12665 | Not Available | Positive | 2766767 - 2767984 | 44179.6 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | LPB072_RS12670 | Not Available | Positive | 2768024 - 2768848 | 29390.4 |
| pilt/pilu family type 4a pilus atpase | LPB072_RS12675 | Not Available | Positive | 2768932 - 2770092 | 42158.8 |
| succinyl-diaminopimelate desuccinylase | LPB072_RS12680 | Not Available | Positive | 2770092 - 2771267 | 41564.5 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | LPB072_RS12685 | Not Available | Positive | 2771273 - 2772166 | 32028.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
