Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-formylglutamate deformylase | LPB072_RS12590 | Not Available | Positive | 2744845 - 2745657 | 29853.6 |
| efflux rnd transporter permease subunit | LPB072_RS12595 | Not Available | Negative | 2745688 - 2748870 | 113247.0 |
| efflux rnd transporter periplasmic adaptor subunit | LPB072_RS12600 | Not Available | Negative | 2748994 - 2750139 | 39759.0 |
| efflux transporter outer membrane subunit | LPB072_RS12605 | Not Available | Negative | 2750136 - 2751569 | 49548.4 |
| peptide deformylase | LPB072_RS12610 | Not Available | Negative | 2751707 - 2752246 | 19760.9 |
| hypothetical protein | LPB072_RS12615 | Not Available | Positive | 2752466 - 2752840 | 13437.5 |
| duf3024 domain-containing protein | LPB072_RS24205 | Not Available | Negative | 2752989 - 2753105 | 4250.98 |
| nad(p)/fad-dependent oxidoreductase | LPB072_RS12625 | Not Available | Positive | 2753472 - 2754608 | 40150.8 |
| helix-turn-helix transcriptional regulator | LPB072_RS12630 | Not Available | Negative | 2754758 - 2755696 | 34478.1 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | LPB072_RS12635 | Not Available | Negative | 2755693 - 2757792 | 75390.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
