Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine synthase | LPB072_RS12540 | Not Available | Negative | 2728436 - 2732455 | 144277.0 |
| hypothetical protein | LPB072_RS12545 | Not Available | Negative | 2732606 - 2733277 | 22871.3 |
| type i methionyl aminopeptidase | LPB072_RS12550 | Not Available | Positive | 2733650 - 2734468 | 29827.8 |
| [protein-pii] uridylyltransferase | LPB072_RS12555 | Not Available | Positive | 2734472 - 2737216 | 102696.0 |
| histidine utilization repressor | LPB072_RS12560 | Not Available | Negative | 2737241 - 2737960 | 27000.6 |
| urocanate hydratase | LPB072_RS12565 | Not Available | Positive | 2738189 - 2739976 | 64481.6 |
| histidine ammonia-lyase | LPB072_RS12570 | Not Available | Positive | 2740037 - 2741575 | 53654.7 |
| hutd family protein | LPB072_RS12575 | Not Available | Positive | 2741590 - 2742174 | 20875.0 |
| imidazolonepropionase | LPB072_RS12580 | Not Available | Positive | 2742171 - 2743412 | 43534.6 |
| formimidoylglutamate deiminase | LPB072_RS12585 | Not Available | Positive | 2743409 - 2744812 | 50605.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
