Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LPB072_RS12485 | Not Available | Negative | 2721327 - 2721851 | 19000.3 |
| ydei/ompd-associated family protein | LPB072_RS12490 | Not Available | Negative | 2722114 - 2722695 | 21231.6 |
| gyri-like domain-containing protein | LPB072_RS12495 | Not Available | Negative | 2722845 - 2723453 | 22896.8 |
| duf1801 domain-containing protein | LPB072_RS12500 | Not Available | Negative | 2723524 - 2723883 | 12951.5 |
| hypothetical protein | LPB072_RS12505 | Not Available | Negative | 2724025 - 2724318 | 10642.8 |
| hypothetical protein | LPB072_RS12510 | Not Available | Negative | 2724414 - 2724788 | 14000.6 |
| duf2721 domain-containing protein | LPB072_RS12515 | Not Available | Negative | 2724821 - 2725291 | 16542.6 |
| hemerythrin domain-containing protein | LPB072_RS12520 | Not Available | Negative | 2725502 - 2726044 | 20122.1 |
| duf808 domain-containing protein | LPB072_RS12525 | Not Available | Negative | 2726173 - 2727144 | 33667.5 |
| phytanoyl-coa dioxygenase family protein | LPB072_RS12530 | Not Available | Negative | 2727159 - 2727989 | 30922.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
