Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1996 domain-containing protein | LPB072_RS12290 | Not Available | Negative | 2674844 - 2676586 | 60995.7 |
| bifunctional diguanylate cyclase/phosphodiesterase | LPB072_RS12295 | Not Available | Negative | 2677582 - 2680563 | 109317.0 |
| rna recognition motif domain-containing protein | LPB072_RS12300 | Not Available | Positive | 2680818 - 2681126 | 11231.4 |
| iclr family transcriptional regulator c-terminal domain-containing protein | LPB072_RS12305 | Not Available | Negative | 2681424 - 2682158 | 26884.9 |
| 4-hydroxybenzoate 3-monooxygenase | LPB072_RS12310 | Not Available | Positive | 2682444 - 2683631 | 43357.6 |
| gnat family n-acetyltransferase | LPB072_RS12315 | Not Available | Positive | 2684096 - 2684632 | 19215.0 |
| coa transferase | LPB072_RS12320 | Not Available | Positive | 2684915 - 2685823 | 31822.0 |
| duf2182 domain-containing protein | LPB072_RS12325 | Not Available | Negative | 2685972 - 2686766 | 27738.6 |
| duf1326 domain-containing protein | LPB072_RS12330 | Not Available | Negative | 2686774 - 2687376 | 20784.7 |
| hypothetical protein | LPB072_RS23900 | Not Available | Positive | 2687673 - 2689514 | 67343.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
