Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-f family atp-binding cassette domain-containing protein | LPB072_RS12085 | Not Available | Negative | 2611141 - 2612769 | 60021.1 |
| cupin domain-containing protein | LPB072_RS12090 | Not Available | Negative | 2613034 - 2613537 | 18065.3 |
| duf308 domain-containing protein | LPB072_RS12095 | Not Available | Positive | 2613980 - 2614234 | 9064.36 |
| mechanosensitive ion channel family protein | LPB072_RS12100 | Not Available | Positive | 2614377 - 2615450 | 39255.7 |
| hypothetical protein | LPB072_RS12105 | Not Available | Positive | 2615508 - 2616107 | 21257.2 |
| flavin monoamine oxidase family protein | LPB072_RS12110 | Not Available | Positive | 2616241 - 2617911 | 61062.9 |
| carbon-nitrogen hydrolase family protein | LPB072_RS12115 | Not Available | Positive | 2617914 - 2618735 | 29274.5 |
| oligosaccharide flippase family protein | LPB072_RS12120 | Not Available | Positive | 2619106 - 2620419 | 49771.8 |
| glycosyltransferase family 4 protein | LPB072_RS12125 | Not Available | Positive | 2620466 - 2621662 | 44016.1 |
| o-antigen ligase family protein | LPB072_RS12130 | Not Available | Negative | 2621765 - 2623399 | 60487.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
