Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | LPB072_RS12035 | Not Available | Positive | 2601159 - 2601932 | 26547.0 |
| enoyl-coa hydratase family protein | LPB072_RS12040 | Not Available | Positive | 2601961 - 2602815 | 30842.2 |
| acyl-coa dehydrogenase family protein | LPB072_RS12045 | Not Available | Positive | 2602832 - 2603998 | 41352.4 |
| amp-binding protein | LPB072_RS12050 | Not Available | Positive | 2604019 - 2605629 | 57976.0 |
| rida family protein | LPB072_RS12055 | Not Available | Positive | 2605682 - 2606074 | 14146.1 |
| abc transporter substrate-binding protein | LPB072_RS12060 | Not Available | Positive | 2606326 - 2607513 | 41721.2 |
| branched-chain amino acid abc transporter permease | LPB072_RS12065 | Not Available | Positive | 2607610 - 2608473 | 31058.4 |
| branched-chain amino acid abc transporter permease | LPB072_RS12070 | Not Available | Positive | 2608559 - 2609566 | 36652.6 |
| abc transporter atp-binding protein | LPB072_RS12075 | Not Available | Positive | 2609563 - 2610324 | 27345.9 |
| abc transporter atp-binding protein | LPB072_RS12080 | Not Available | Positive | 2610327 - 2611040 | 25582.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
