Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LPB072_RS11945 | Not Available | Negative | 2580511 - 2581116 | 21318.2 |
| hypothetical protein | LPB072_RS23895 | Not Available | Negative | 2581244 - 2581648 | 14369.0 |
| virb4 family type iv secretion/conjugal transfer atpase | LPB072_RS11955 | Not Available | Negative | 2581740 - 2584211 | 93234.0 |
| type iv secretion system protein virb3 | LPB072_RS11960 | Not Available | Negative | 2584246 - 2584566 | 12236.7 |
| trbc/virb2 family protein | LPB072_RS11965 | Not Available | Negative | 2584604 - 2584966 | 12371.2 |
| lytic transglycosylase domain-containing protein | LPB072_RS11970 | Not Available | Negative | 2584980 - 2586080 | 38335.1 |
| dihydropteroate synthase | LPB072_RS11975 | Not Available | Negative | 2586330 - 2587160 | 29481.9 |
| atp-dependent zinc metalloprotease ftsh | LPB072_RS11980 | Not Available | Negative | 2587265 - 2589184 | 70170.7 |
| rlme family rna methyltransferase | LPB072_RS11985 | Not Available | Negative | 2589306 - 2589980 | 24364.5 |
| yhby family rna-binding protein | LPB072_RS11990 | Not Available | Positive | 2590026 - 2590496 | 17158.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
