Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4124 domain-containing protein | LPB072_RS11795 | Not Available | Positive | 2549488 - 2550039 | 19670.4 |
| rnfh family protein | LPB072_RS11800 | Not Available | Negative | 2550061 - 2550390 | 11903.4 |
| type ii toxin-antitoxin system rata family toxin | LPB072_RS11805 | Not Available | Negative | 2550387 - 2550833 | 16434.7 |
| ssra-binding protein smpb | LPB072_RS11810 | Not Available | Positive | 2550939 - 2551433 | 18547.4 |
| tolc family protein | LPB072_RS11815 | Not Available | Negative | 2551494 - 2553317 | 65198.5 |
| gnat family n-acetyltransferase | LPB072_RS11820 | Not Available | Negative | 2553465 - 2554340 | 32482.5 |
| domon-like domain-containing protein | LPB072_RS11830 | Not Available | Positive | 2554668 - 2555270 | 21775.6 |
| exo-beta-n-acetylmuramidase namz domain-containing protein | LPB072_RS11835 | Not Available | Positive | 2555294 - 2556496 | 44979.0 |
| gnat family n-acetyltransferase | LPB072_RS11840 | Not Available | Negative | 2556604 - 2557107 | 18089.1 |
| phosphoglucosamine mutase | LPB072_RS11845 | Not Available | Negative | 2557104 - 2558450 | 47863.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
