Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pfl_4703 family integrating conjugative element protein | LPB072_RS11650 | Not Available | Negative | 2520156 - 2520944 | 28600.9 |
| tigr03750 family conjugal transfer protein | LPB072_RS11655 | Not Available | Negative | 2520941 - 2521414 | 17506.2 |
| duf2976 domain-containing protein | LPB072_RS11660 | Not Available | Negative | 2521436 - 2521837 | 14290.0 |
| duf3262 family protein | LPB072_RS11665 | Not Available | Negative | 2521908 - 2522141 | 8176.14 |
| raqprd family integrative conjugative element protein | LPB072_RS11670 | Not Available | Negative | 2522161 - 2522526 | 13496.0 |
| tigr03747 family integrating conjugative element membrane protein | LPB072_RS11675 | Not Available | Negative | 2522558 - 2523316 | 28059.3 |
| type iv conjugative transfer system coupling protein trad | LPB072_RS11680 | Not Available | Negative | 2523313 - 2525586 | 82662.1 |
| pfl_4695 family integrating conjugative element protein | LPB072_RS23155 | Not Available | Negative | 2525597 - 2526115 | 18007.0 |
| lytic transglycosylase domain-containing protein | LPB072_RS11690 | Not Available | Negative | 2526112 - 2526912 | 28331.2 |
| hypothetical protein | LPB072_RS11695 | Not Available | Negative | 2526920 - 2527498 | 21078.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
