Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LPB072_RS11600 | Not Available | Negative | 2509767 - 2510159 | 14288.3 |
| integrating conjugative element protein | LPB072_RS11605 | Not Available | Negative | 2510156 - 2511538 | 48638.1 |
| trau family protein | LPB072_RS11610 | Not Available | Negative | 2511553 - 2512833 | 45302.4 |
| duf1525 domain-containing protein | LPB072_RS11615 | Not Available | Negative | 2512854 - 2513333 | 17244.1 |
| duf1525 domain-containing protein | LPB072_RS11620 | Not Available | Negative | 2513335 - 2513829 | 18899.7 |
| hypothetical protein | LPB072_RS11625 | Not Available | Negative | 2513826 - 2514086 | 9875.75 |
| conjugative transfer atpase | LPB072_RS11630 | Not Available | Negative | 2514076 - 2517045 | 109789.0 |
| tigr03751 family conjugal transfer lipoprotein | LPB072_RS11635 | Not Available | Negative | 2517095 - 2517619 | 19045.4 |
| tigr03752 family integrating conjugative element protein | LPB072_RS11640 | Not Available | Negative | 2517606 - 2519036 | 49316.3 |
| tigr03749 family integrating conjugative element protein | LPB072_RS11645 | Not Available | Negative | 2519059 - 2520141 | 38001.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
