Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsbc family protein | LPB072_RS11555 | Not Available | Negative | 2503589 - 2504344 | 27512.2 |
| ph domain-containing protein | LPB072_RS11560 | Not Available | Negative | 2504382 - 2504894 | 19227.8 |
| hypothetical protein | LPB072_RS11565 | Not Available | Negative | 2504916 - 2505236 | 11585.6 |
| hypothetical protein | LPB072_RS11570 | Not Available | Negative | 2505413 - 2505847 | 15811.0 |
| sprt-like domain-containing protein | LPB072_RS11575 | Not Available | Negative | 2506028 - 2506810 | 28264.5 |
| fita-like ribbon-helix-helix domain-containing protein | LPB072_RS11580 | Not Available | Positive | 2506900 - 2507157 | 9381.21 |
| type ii toxin-antitoxin system vapc family toxin | LPB072_RS11585 | Not Available | Positive | 2507154 - 2507579 | 15364.6 |
| hypothetical protein | LPB072_RS11590 | Not Available | Positive | 2507586 - 2507807 | 8354.9 |
| hypothetical protein | LPB072_RS23445 | Not Available | Positive | 2507884 - 2508102 | 8223.89 |
| conjugal transfer protein trag n-terminal domain-containing protein | LPB072_RS11595 | Not Available | Negative | 2508120 - 2509709 | 57729.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
