Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sco family protein | LPB072_RS11505 | Not Available | Negative | 2495938 - 2496576 | 23174.8 |
| dsba family protein | LPB072_RS11510 | Not Available | Negative | 2496578 - 2497234 | 24073.2 |
| disulfide bond formation protein b | LPB072_RS11515 | Not Available | Negative | 2497231 - 2497647 | 15080.2 |
| signal peptidase ii | LPB072_RS11520 | Not Available | Negative | 2497644 - 2498168 | 19251.4 |
| duf3703 domain-containing protein | LPB072_RS11525 | Not Available | Negative | 2498665 - 2499105 | 16168.9 |
| cation transporter | LPB072_RS11530 | Not Available | Negative | 2499020 - 2499676 | 22951.0 |
| cd(ii)/pb(ii)-responsive transcriptional regulator | LPB072_RS11535 | Not Available | Positive | 2499723 - 2500178 | 16994.5 |
| hypothetical protein | LPB072_RS11540 | Not Available | Negative | 2500714 - 2501712 | 37859.6 |
| duf3262 family protein | LPB072_RS11545 | Not Available | Negative | 2501801 - 2502721 | 32298.2 |
| hypothetical protein | LPB072_RS11550 | Not Available | Negative | 2502724 - 2503575 | 31413.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
