Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110 family transposase | LPB072_RS11460 | Not Available | Negative | 2484465 - 2485745 | 48706.6 |
| barstar family protein | LPB072_RS11465 | Not Available | Positive | 2485827 - 2486081 | 9952.65 |
| copk family periplasmic copper-binding protein | LPB072_RS11470 | Not Available | Positive | 2486576 - 2486857 | 9887.35 |
| heavy metal sensor histidine kinase | LPB072_RS11475 | Not Available | Negative | 2486918 - 2488300 | 50136.2 |
| heavy metal response regulator transcription factor | LPB072_RS11480 | Not Available | Negative | 2488297 - 2488983 | 25771.4 |
| duf2933 domain-containing protein | LPB072_RS23150 | Not Available | Positive | 2489255 - 2489491 | 8694.48 |
| heavy metal translocating p-type atpase | LPB072_RS11485 | Not Available | Positive | 2489498 - 2491882 | 83722.4 |
| methyltransferase family protein | LPB072_RS11490 | Not Available | Negative | 2492426 - 2492824 | 14768.0 |
| l,d-transpeptidase family protein | LPB072_RS11495 | Not Available | Negative | 2493293 - 2494669 | 50605.1 |
| m23 family metallopeptidase | LPB072_RS11500 | Not Available | Negative | 2494572 - 2495900 | 47584.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
