Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite exporter taue/safe family protein | LPB072_RS01095 | Not Available | Negative | 219090 - 219857 | 26557.1 |
| metal-sensing transcriptional repressor | LPB072_RS01100 | Not Available | Negative | 219996 - 220298 | 10859.9 |
| slac1 anion channel family protein | LPB072_RS01105 | Not Available | Negative | 220312 - 221325 | 35602.9 |
| duf2892 domain-containing protein | LPB072_RS01110 | Not Available | Negative | 221385 - 221609 | 8020.96 |
| efflux rnd transporter permease subunit | LPB072_RS01115 | Not Available | Negative | 221692 - 224955 | 116671.0 |
| efflux rnd transporter periplasmic adaptor subunit | LPB072_RS01120 | Not Available | Negative | 224966 - 226075 | 37989.1 |
| alanine racemase | LPB072_RS01125 | Not Available | Negative | 226207 - 227331 | 40025.0 |
| lysophospholipid transporter lplt | LPB072_RS01130 | Not Available | Positive | 227543 - 228826 | 45659.9 |
| hypothetical protein | LPB072_RS01135 | Not Available | Negative | 229031 - 230170 | 40794.3 |
| helix-turn-helix transcriptional regulator | LPB072_RS01140 | Not Available | Negative | 230286 - 231008 | 26969.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
