Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| jab domain-containing protein | LPB072_RS11310 | Not Available | Positive | 2452582 - 2453181 | 21831.5 |
| hypothetical protein | LPB072_RS11315 | Not Available | Positive | 2453292 - 2453651 | 12911.3 |
| hypothetical protein | LPB072_RS11320 | Not Available | Positive | 2453728 - 2454333 | 23136.7 |
| dead/deah box helicase | LPB072_RS11325 | Not Available | Positive | 2454462 - 2456837 | 87042.3 |
| tyrosine-type recombinase/integrase | LPB072_RS23145 | Not Available | Positive | 2456915 - 2457907 | 38020.8 |
| hypothetical protein | LPB072_RS11335 | Not Available | Positive | 2458543 - 2459073 | 18241.2 |
| gdccvxc domain-containing (seleno)protein | LPB072_RS23890 | Not Available | Positive | 2459391 - 2459603 | 7835.63 |
| tolc family protein | LPB072_RS11350 | Not Available | Positive | 2460786 - 2462018 | 46670.4 |
| efflux rnd transporter periplasmic adaptor subunit | LPB072_RS11355 | Not Available | Positive | 2462015 - 2463640 | 57840.9 |
| efflux rnd transporter permease subunit | LPB072_RS11360 | Not Available | Positive | 2463637 - 2466807 | 115391.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
