Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf302 domain-containing protein | LPB072_RS11210 | Not Available | Negative | 2435552 - 2436004 | 15994.4 |
| hypothetical protein | LPB072_RS11215 | Not Available | Negative | 2436001 - 2436186 | 6523.79 |
| hypothetical protein | LPB072_RS11220 | Not Available | Negative | 2436375 - 2436791 | 14401.4 |
| merr family transcriptional regulator | LPB072_RS11225 | Not Available | Positive | 2436904 - 2437335 | 15677.1 |
| heavy metal response regulator transcription factor | LPB072_RS11230 | Not Available | Positive | 2437715 - 2438401 | 25660.3 |
| heavy metal sensor histidine kinase | LPB072_RS11235 | Not Available | Positive | 2438398 - 2439780 | 50480.9 |
| bon domain-containing protein | LPB072_RS11240 | Not Available | Negative | 2439994 - 2440305 | 10956.0 |
| copk family periplasmic copper-binding protein | LPB072_RS11245 | Not Available | Negative | 2440563 - 2440844 | 9966.33 |
| copper resistance system multicopper oxidase | LPB072_RS11250 | Not Available | Positive | 2441444 - 2443294 | 67579.8 |
| copper resistance protein b | LPB072_RS11255 | Not Available | Positive | 2443323 - 2444591 | 44804.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
