Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | LPB072_RS11115 | Not Available | Positive | 2413037 - 2413426 | 14234.0 |
| hypothetical protein | LPB072_RS11120 | Not Available | Positive | 2413503 - 2413775 | 9907.83 |
| dead/deah box helicase | LPB072_RS11125 | Not Available | Positive | 2413831 - 2415855 | 73633.0 |
| kap family ntpase | LPB072_RS11130 | Not Available | Negative | 2416286 - 2419261 | 110909.0 |
| trlf family aaa-like atpase | LPB072_RS11135 | Not Available | Positive | 2419837 - 2422683 | 104530.0 |
| mfs transporter | LPB072_RS11140 | Not Available | Negative | 2423124 - 2424443 | 46533.4 |
| metal-sensing transcriptional repressor | LPB072_RS11145 | Not Available | Negative | 2424489 - 2424767 | 10390.7 |
| hypothetical protein | LPB072_RS11150 | Not Available | Positive | 2424827 - 2425231 | 14638.4 |
| hupe/urej family protein | LPB072_RS11155 | Not Available | Positive | 2425303 - 2426040 | 27191.8 |
| transmembrane anchor protein | LPB072_RS11160 | Not Available | Positive | 2426060 - 2426722 | 23088.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
