Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nrde family protein | LPB072_RS11015 | Not Available | Negative | 2392183 - 2393037 | 31051.5 |
| ygfz/gcvt domain-containing protein | LPB072_RS11020 | Not Available | Negative | 2393080 - 2394021 | 33675.5 |
| endolytic transglycosylase mltg | LPB072_RS11025 | Not Available | Positive | 2394236 - 2395207 | 34928.8 |
| dtmp kinase | LPB072_RS11030 | Not Available | Positive | 2395213 - 2395881 | 24225.9 |
| dna polymerase iii subunit delta' | LPB072_RS11035 | Not Available | Positive | 2395886 - 2396914 | 37576.0 |
| pilz domain-containing protein | LPB072_RS11040 | Not Available | Positive | 2396945 - 2397316 | 13144.7 |
| tatd family hydrolase | LPB072_RS11045 | Not Available | Positive | 2397380 - 2398192 | 29618.0 |
| ankyrin repeat domain-containing protein | LPB072_RS11050 | Not Available | Positive | 2398195 - 2398881 | 24494.4 |
| tripartite tricarboxylate transporter tctb family protein | LPB072_RS11055 | Not Available | Positive | 2398935 - 2399423 | 17133.7 |
| tripartite tricarboxylate transporter permease | LPB072_RS11060 | Not Available | Positive | 2399440 - 2400951 | 52935.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
