Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | LPB072_RS10915 | Not Available | Positive | 2372079 - 2372825 | 26554.1 |
| sir2 family nad-dependent protein deacylase | LPB072_RS10920 | Not Available | Positive | 2372825 - 2373562 | 26229.2 |
| hypothetical protein | LPB072_RS10925 | Not Available | Positive | 2373559 - 2373909 | 13098.6 |
| yip1 family protein | LPB072_RS23685 | Not Available | Positive | 2374023 - 2375267 | 43441.3 |
| chromate transporter | LPB072_RS10935 | Not Available | Negative | 2375316 - 2375912 | 21363.6 |
| chromate transporter | LPB072_RS10940 | Not Available | Negative | 2375909 - 2376535 | 21922.7 |
| response regulator | LPB072_RS10945 | Not Available | Negative | 2376629 - 2377018 | 14198.0 |
| sensor histidine kinase | LPB072_RS24070 | Not Available | Negative | 2377029 - 2378648 | 60253.8 |
| 3-oxoacyl-acp reductase fabg | LPB072_RS10955 | Not Available | Negative | 2378818 - 2379561 | 26173.7 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | LPB072_RS10960 | Not Available | Negative | 2379664 - 2381808 | 76719.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
