Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | LPB072_RS10670 | Not Available | Positive | 2310799 - 2310999 | 6601.12 |
| c40 family peptidase | LPB072_RS10675 | Not Available | Negative | 2311161 - 2311727 | 20503.6 |
| helix-turn-helix domain-containing protein | LPB072_RS10680 | Not Available | Positive | 2312078 - 2312932 | 31038.2 |
| isochorismatase family protein | LPB072_RS10685 | Not Available | Positive | 2313037 - 2313636 | 21852.5 |
| propionate--coa ligase | LPB072_RS10690 | Not Available | Positive | 2313876 - 2315777 | 69793.1 |
| arsr/smtb family transcription factor | LPB072_RS10695 | Not Available | Positive | 2315886 - 2316260 | 13701.8 |
| barstar family protein | LPB072_RS10700 | Not Available | Positive | 2316466 - 2319350 | 103731.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | LPB072_RS10705 | Not Available | Positive | 2319462 - 2320727 | 43848.3 |
| dihydrolipoyl dehydrogenase | LPB072_RS10710 | Not Available | Positive | 2320795 - 2322222 | 50252.4 |
| cell division protein zape | LPB072_RS10715 | Not Available | Positive | 2322355 - 2323452 | 41599.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
