Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trmh family rna methyltransferase | LPB072_RS10565 | Not Available | Positive | 2281896 - 2282675 | 27078.8 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | LPB072_RS10570 | Not Available | Positive | 2282905 - 2284062 | 41081.1 |
| leucine efflux protein leue | LPB072_RS10575 | Not Available | Positive | 2284059 - 2284724 | 23568.3 |
| hypothetical protein | LPB072_RS10580 | Not Available | Positive | 2284766 - 2285128 | 13911.1 |
| carbamoyl-phosphate synthase large subunit | LPB072_RS10585 | Not Available | Positive | 2285185 - 2288472 | 118930.0 |
| transcription elongation factor grea | LPB072_RS10590 | Not Available | Positive | 2288635 - 2289111 | 17023.0 |
| duf4149 domain-containing protein | LPB072_RS10595 | Not Available | Positive | 2289151 - 2289615 | 16289.7 |
| hypothetical protein | LPB072_RS10600 | Not Available | Positive | 2289658 - 2290044 | 13962.8 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | LPB072_RS10605 | Not Available | Negative | 2290196 - 2291041 | 29691.4 |
| response regulator transcription factor | LPB072_RS10610 | Not Available | Negative | 2291121 - 2291747 | 22964.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
