Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 2262008 - 2262092 | Not Available |
| ribonuclease r | LPB072_RS10470 | Not Available | Positive | 2262128 - 2264335 | 82235.4 |
| yggt family protein | LPB072_RS10475 | Not Available | Positive | 2264443 - 2264997 | 20082.8 |
| nad(p)h-hydrate dehydratase | LPB072_RS10480 | Not Available | Negative | 2265013 - 2266554 | 53315.1 |
| peptidoglycan-binding protein lysm | LPB072_RS10485 | Not Available | Negative | 2266554 - 2267045 | 17502.8 |
| 30s ribosomal protein s2 | LPB072_RS10490 | Not Available | Positive | 2267445 - 2268203 | 27811.8 |
| translation elongation factor ts | LPB072_RS10495 | Not Available | Positive | 2268310 - 2269227 | 32439.9 |
| ump kinase | LPB072_RS10500 | Not Available | Positive | 2269409 - 2270119 | 24917.5 |
| ribosome recycling factor | LPB072_RS10505 | Not Available | Positive | 2270167 - 2270727 | 20885.1 |
| polyprenyl diphosphate synthase | LPB072_RS10510 | Not Available | Positive | 2270750 - 2271526 | 28482.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
