Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LPB072_RS10365 | Not Available | Positive | 2241839 - 2242144 | 11253.1 |
| duf6172 family protein | LPB072_RS10370 | Not Available | Positive | 2242243 - 2242605 | 13222.2 |
| dead/deah box helicase | LPB072_RS10375 | Not Available | Negative | 2242602 - 2243858 | 45390.7 |
| translation initiation factor sui1 | LPB072_RS10380 | Not Available | Positive | 2243910 - 2244278 | 12268.1 |
| redoxin family protein | LPB072_RS10385 | Not Available | Negative | 2244291 - 2244845 | 20482.8 |
| phosphoserine phosphatase serb | LPB072_RS10390 | Not Available | Negative | 2244896 - 2245621 | 26017.6 |
| duf4405 domain-containing protein | LPB072_RS10395 | Not Available | Negative | 2245669 - 2246178 | 18051.2 |
| hypothetical protein | LPB072_RS10400 | Not Available | Negative | 2246198 - 2247046 | 30162.6 |
| transcription-repair coupling factor | LPB072_RS10405 | Not Available | Negative | 2247121 - 2250705 | 132198.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | LPB072_RS10410 | Not Available | Positive | 2250798 - 2251532 | 25927.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
