Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | LPB072_RS10315 | Not Available | Negative | 2231647 - 2232825 | 42639.4 |
| cysb family hth-type transcriptional regulator | LPB072_RS10320 | Not Available | Negative | 2232946 - 2233890 | 35074.5 |
| sirohydrochlorin chelatase | LPB072_RS10325 | Not Available | Negative | 2233887 - 2234255 | 12852.7 |
| lps export abc transporter permease lptg | LPB072_RS10330 | Not Available | Negative | 2234260 - 2235378 | 41809.1 |
| lps export abc transporter permease lptf | LPB072_RS10335 | Not Available | Negative | 2235375 - 2236508 | 41734.0 |
| leucyl aminopeptidase | LPB072_RS10340 | Not Available | Positive | 2236535 - 2238049 | 51760.7 |
| dna polymerase iii subunit chi | LPB072_RS10345 | Not Available | Positive | 2238115 - 2238561 | 16400.9 |
| branched-chain amino acid abc transporter substrate-binding protein | LPB072_RS10350 | Not Available | Positive | 2238766 - 2239968 | 41510.6 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | LPB072_RS10355 | Not Available | Positive | 2240206 - 2240994 | 27661.1 |
| 3'-5' exonuclease | LPB072_RS10360 | Not Available | Negative | 2241159 - 2241773 | 22192.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
