Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | LPB072_RS09815 | Not Available | Positive | 2110567 - 2111397 | 30845.6 |
| mboat family o-acyltransferase | LPB072_RS09820 | Not Available | Positive | 2112035 - 2113531 | 56604.8 |
| alginate o-acetyltransferase algx-related protein | LPB072_RS09830 | Not Available | Positive | 2113534 - 2115066 | 56324.8 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 2115381 - 2115477 | Not Available |
| dna polymerase iii subunit gamma/tau | LPB072_RS09840 | Not Available | Positive | 2115552 - 2117522 | 70046.7 |
| ybab/ebfc family nucleoid-associated protein | LPB072_RS09845 | Not Available | Positive | 2117574 - 2117906 | 11738.4 |
| recombination mediator recr | LPB072_RS09850 | Not Available | Positive | 2118032 - 2118637 | 22032.6 |
| mapeg family protein | LPB072_RS09855 | Not Available | Positive | 2118768 - 2119175 | 14860.5 |
| abc transporter substrate-binding protein | LPB072_RS09860 | Not Available | Positive | 2119352 - 2120398 | 37537.2 |
| transglycosylase slt domain-containing protein | LPB072_RS09865 | Not Available | Negative | 2120422 - 2122137 | 62310.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
