Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein | LPB072_RS09670 | Not Available | Negative | 2077736 - 2078788 | 38346.5 |
| fumarylacetoacetate hydrolase family protein | LPB072_RS09675 | Not Available | Negative | 2078980 - 2079675 | 25154.0 |
| 2fe-2s iron-sulfur cluster-binding protein | LPB072_RS09680 | Not Available | Negative | 2079741 - 2080064 | 11336.5 |
| glutamine synthetase family protein | LPB072_RS09685 | Not Available | Negative | 2080076 - 2081569 | 54273.6 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | LPB072_RS09690 | Not Available | Negative | 2081566 - 2082960 | 51585.8 |
| gntr family transcriptional regulator | LPB072_RS09695 | Not Available | Positive | 2083026 - 2083745 | 26469.1 |
| thymidine phosphorylase family protein | LPB072_RS09700 | Not Available | Positive | 2083782 - 2085368 | 56891.4 |
| ribose-phosphate diphosphokinase | LPB072_RS09705 | Not Available | Positive | 2085368 - 2086282 | 32240.8 |
| maleylacetoacetate isomerase | LPB072_RS09710 | Not Available | Positive | 2086445 - 2087086 | 23724.4 |
| peptidoglycan editing factor pgef | LPB072_RS09715 | Not Available | Positive | 2087086 - 2087901 | 28510.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
