Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4347 domain-containing protein | LPB072_RS09475 | Not Available | Positive | 2037738 - 2039849 | 71343.6 |
| mfs transporter | LPB072_RS09480 | Not Available | Positive | 2040048 - 2041265 | 42287.5 |
| thiamine pyrophosphate-binding protein | LPB072_RS09485 | Not Available | Positive | 2041287 - 2042987 | 60786.9 |
| helix-turn-helix transcriptional regulator | LPB072_RS09490 | Not Available | Positive | 2043125 - 2043826 | 25763.4 |
| crp/fnr family transcriptional regulator | LPB072_RS09495 | Not Available | Positive | 2043898 - 2044548 | 24243.4 |
| hypothetical protein | LPB072_RS09500 | Not Available | Negative | 2044523 - 2046580 | 73433.3 |
| phosphatase pap2 family protein | LPB072_RS09505 | Not Available | Negative | 2046743 - 2047825 | 38544.8 |
| adenylate/guanylate cyclase domain-containing protein | LPB072_RS09510 | Not Available | Negative | 2047852 - 2049678 | 67015.1 |
| swib/mdm2 domain-containing protein | LPB072_RS09515 | Not Available | Negative | 2049843 - 2050340 | 17314.9 |
| ribonuclease e activity regulator rraa | LPB072_RS09520 | Not Available | Positive | 2050599 - 2051108 | 17569.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
