Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent chaperone clpb | LPB072_RS09425 | Not Available | Positive | 2024281 - 2026899 | 96080.0 |
| duf1631 family protein | LPB072_RS09430 | Not Available | Positive | 2027162 - 2029642 | 90629.9 |
| malonate--coa ligase | LPB072_RS09435 | Not Available | Negative | 2029668 - 2031203 | 55664.9 |
| malonyl-coa decarboxylase | LPB072_RS09440 | Not Available | Negative | 2031222 - 2032508 | 47999.9 |
| trap transporter large permease | LPB072_RS09445 | Not Available | Negative | 2032530 - 2033837 | 46066.7 |
| trap transporter small permease subunit | LPB072_RS09450 | Not Available | Negative | 2033873 - 2034406 | 19561.5 |
| trap transporter substrate-binding protein dctp | LPB072_RS09455 | Not Available | Negative | 2034396 - 2035403 | 36159.6 |
| gntr family transcriptional regulator | LPB072_RS09460 | Not Available | Positive | 2035555 - 2036274 | 26675.0 |
| paai family thioesterase | LPB072_RS09465 | Not Available | Positive | 2036337 - 2036825 | 17439.3 |
| hypothetical protein | LPB072_RS09470 | Not Available | Negative | 2036989 - 2037207 | 7858.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
