Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease | LPB072_RS00905 | Not Available | Negative | 183790 - 185112 | 46453.0 |
| trap transporter small permease subunit | LPB072_RS00910 | Not Available | Negative | 185109 - 185702 | 21438.8 |
| c4-dicarboxylate trap transporter substrate-binding protein | LPB072_RS00915 | Not Available | Negative | 185704 - 186768 | 37369.8 |
| tetr/acrr family transcriptional regulator | LPB072_RS00920 | Not Available | Negative | 186789 - 187508 | 26296.5 |
| acetoacetate--coa ligase | LPB072_RS00925 | Not Available | Positive | 187642 - 189840 | 80000.8 |
| yada family autotransporter adhesin | LPB072_RS00930 | Not Available | Positive | 190215 - 192026 | 58053.9 |
| sdr family nad(p)-dependent oxidoreductase | LPB072_RS00935 | Not Available | Positive | 192219 - 193007 | 27076.4 |
| marr family winged helix-turn-helix transcriptional regulator | LPB072_RS22905 | Not Available | Negative | 193018 - 193641 | 21960.2 |
| flavin reductase family protein | LPB072_RS00945 | Not Available | Negative | 193638 - 194159 | 18362.6 |
| peptidase m29 | LPB072_RS00950 | Not Available | Positive | 194351 - 195400 | 37506.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
