Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | LPB072_RS09325 | Not Available | Negative | 2004970 - 2005788 | 28736.7 |
| o-acetylhomoserine aminocarboxypropyltransferase | LPB072_RS09330 | Not Available | Negative | 2005874 - 2007184 | 46532.4 |
| cbs domain-containing protein | LPB072_RS09335 | Not Available | Positive | 2007315 - 2007788 | 17511.1 |
| polyhydroxyalkanoate depolymerase | LPB072_RS09340 | Not Available | Negative | 2007955 - 2009172 | 45866.9 |
| glutathione s-transferase | LPB072_RS09345 | Not Available | Positive | 2009307 - 2009963 | 23909.0 |
| cupin domain-containing protein | LPB072_RS09350 | Not Available | Negative | 2010106 - 2010531 | 15798.7 |
| abc transporter substrate-binding protein | LPB072_RS09355 | Not Available | Negative | 2010789 - 2011937 | 40036.3 |
| chorismate synthase | LPB072_RS09360 | Not Available | Positive | 2012180 - 2013280 | 38590.0 |
| threonine synthase | LPB072_RS09365 | Not Available | Positive | 2013308 - 2014744 | 52410.5 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | LPB072_RS09370 | Not Available | Positive | 2014764 - 2015300 | 19743.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
