Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | LPB072_RS09275 | Not Available | Negative | 1995289 - 1996452 | 40445.4 |
| lytic transglycosylase domain-containing protein | LPB072_RS09280 | Not Available | Negative | 1996524 - 1997483 | 34360.0 |
| fad-binding oxidoreductase | LPB072_RS09285 | Not Available | Negative | 1997480 - 1998907 | 50331.1 |
| duf2069 domain-containing protein | LPB072_RS09290 | Not Available | Negative | 1998904 - 1999380 | 16978.1 |
| yihy family inner membrane protein | LPB072_RS09295 | Not Available | Positive | 1999447 - 2000709 | 46578.3 |
| voc family protein | LPB072_RS09300 | Not Available | Positive | 2000746 - 2001111 | 12803.3 |
| duf962 domain-containing protein | LPB072_RS09305 | Not Available | Negative | 2001156 - 2001485 | 12547.2 |
| cytochrome p450 | LPB072_RS09310 | Not Available | Negative | 2001518 - 2002804 | 46638.0 |
| plp-dependent aminotransferase family protein | LPB072_RS09315 | Not Available | Negative | 2002868 - 2004400 | 55178.5 |
| duf2917 domain-containing protein | LPB072_RS09320 | Not Available | Positive | 2004594 - 2004968 | 13220.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
