Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | LPB072_RS09125 | Not Available | Positive | 1967210 - 1968430 | 45393.9 |
| hypothetical protein | LPB072_RS09135 | Not Available | Positive | 1968857 - 1969933 | 41096.6 |
| helix-turn-helix transcriptional regulator | LPB072_RS09140 | Not Available | Positive | 1970062 - 1970292 | 8176.89 |
| helix-turn-helix domain-containing protein | LPB072_RS09145 | Not Available | Positive | 1970303 - 1970596 | 11051.4 |
| hypothetical protein | LPB072_RS09150 | Not Available | Positive | 1970593 - 1970832 | 8227.75 |
| hypothetical protein | LPB072_RS09155 | Not Available | Positive | 1970813 - 1971313 | 18312.4 |
| hypothetical protein | LPB072_RS09160 | Not Available | Positive | 1971629 - 1972174 | 20559.8 |
| hypothetical protein | LPB072_RS09165 | Not Available | Positive | 1972458 - 1972709 | 8980.88 |
| hypothetical protein | LPB072_RS09170 | Not Available | Negative | 1972761 - 1972982 | 8466.22 |
| putative motility protein | LPB072_RS09175 | Not Available | Positive | 1973391 - 1973594 | 6914.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
