Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prephenate dehydrogenase | LPB072_RS09075 | Not Available | Negative | 1956546 - 1957421 | 31553.4 |
| prephenate dehydratase | LPB072_RS09080 | Not Available | Negative | 1957461 - 1958558 | 39600.2 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | LPB072_RS09085 | Not Available | Negative | 1958563 - 1959669 | 39885.8 |
| dna gyrase subunit a | LPB072_RS09090 | Not Available | Negative | 1959666 - 1962341 | 99077.4 |
| outer membrane protein ompa | LPB072_RS09095 | Not Available | Positive | 1962603 - 1963268 | 22434.4 |
| hypothetical protein | LPB072_RS09100 | Not Available | Positive | 1963303 - 1963887 | 21644.3 |
| hypothetical protein | LPB072_RS09105 | Not Available | Positive | 1963959 - 1965146 | 42348.4 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | LPB072_RS09110 | Not Available | Positive | 1965167 - 1965880 | 26030.2 |
| had family hydrolase | LPB072_RS09115 | Not Available | Positive | 1965880 - 1966563 | 23772.4 |
| Tmrna,resume consensus sequence (at 85): actaactgcaaacgacga | Not Available | Not Available | Positive | 1966576 - 1966965 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
