Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | LPB072_RS08975 | Not Available | Positive | 1935441 - 1936136 | 25057.4 |
| sensor histidine kinase | LPB072_RS08980 | Not Available | Positive | 1936133 - 1937584 | 53382.4 |
| tripartite tricarboxylate transporter substrate binding protein | LPB072_RS08985 | Not Available | Negative | 1937565 - 1938539 | 34103.1 |
| rna-binding s4 domain-containing protein | LPB072_RS08990 | Not Available | Negative | 1938542 - 1938997 | 16699.9 |
| sigma-54 interaction domain-containing protein | LPB072_RS08995 | Not Available | Positive | 1939093 - 1940583 | 53954.0 |
| substrate-binding domain-containing protein | LPB072_RS09000 | Not Available | Positive | 1940738 - 1941937 | 42867.7 |
| abc transporter atp-binding protein | LPB072_RS09005 | Not Available | Positive | 1942103 - 1942864 | 27053.7 |
| abc transporter atp-binding protein | LPB072_RS09010 | Not Available | Positive | 1942861 - 1943598 | 26474.3 |
| branched-chain amino acid abc transporter permease | LPB072_RS09015 | Not Available | Positive | 1943684 - 1944670 | 34819.5 |
| branched-chain amino acid abc transporter permease | LPB072_RS09020 | Not Available | Positive | 1944684 - 1945796 | 39737.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
