Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease | LPB072_RS08925 | Not Available | Positive | 1924101 - 1924583 | 18122.7 |
| trap transporter large permease | LPB072_RS08930 | Not Available | Positive | 1924586 - 1925884 | 45987.4 |
| mannitol dehydrogenase family protein | LPB072_RS08935 | Not Available | Negative | 1926114 - 1927544 | 52059.3 |
| age family epimerase/isomerase | LPB072_RS08940 | Not Available | Negative | 1927544 - 1928698 | 42837.9 |
| sugar kinase | LPB072_RS08945 | Not Available | Negative | 1928868 - 1929797 | 32189.6 |
| sdr family nad(p)-dependent oxidoreductase | LPB072_RS08950 | Not Available | Negative | 1929892 - 1930653 | 26253.1 |
| laci family dna-binding transcriptional regulator | LPB072_RS08955 | Not Available | Negative | 1930650 - 1931726 | 38695.6 |
| tripartite tricarboxylate transporter permease | LPB072_RS08960 | Not Available | Negative | 1932168 - 1933709 | 53215.3 |
| tripartite tricarboxylate transporter tctb family protein | LPB072_RS08965 | Not Available | Negative | 1933732 - 1934163 | 15023.8 |
| bug family tripartite tricarboxylate transporter substrate binding protein | LPB072_RS08970 | Not Available | Negative | 1934256 - 1935251 | 34526.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
