Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase family protein | LPB072_RS08875 | Not Available | Negative | 1913273 - 1914505 | 45645.1 |
| nuclear transport factor 2 family protein | LPB072_RS08880 | Not Available | Negative | 1914733 - 1915782 | 36915.6 |
| cysteine--trna ligase | LPB072_RS08885 | Not Available | Positive | 1916016 - 1917401 | 51052.8 |
| dna-3-methyladenine glycosylase family protein | LPB072_RS08890 | Not Available | Positive | 1917401 - 1918054 | 24197.4 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | LPB072_RS08895 | Not Available | Positive | 1918189 - 1919178 | 36734.9 |
| trna lysidine(34) synthetase tils | LPB072_RS08900 | Not Available | Positive | 1919180 - 1920160 | 35308.1 |
| aspartate kinase | LPB072_RS08905 | Not Available | Positive | 1920267 - 1921547 | 45834.1 |
| Trna-ser | Not Available | Not Available | Positive | 1921604 - 1921695 | Not Available |
| eama family transporter | LPB072_RS08915 | Not Available | Positive | 1921805 - 1922719 | 31806.9 |
| trap transporter substrate-binding protein | LPB072_RS08920 | Not Available | Positive | 1922988 - 1923998 | 36943.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
