Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase i | LPB072_RS00855 | Not Available | Negative | 173557 - 174165 | 22341.6 |
| solute carrier family 23 protein | LPB072_RS00860 | Not Available | Negative | 174170 - 175453 | 43927.1 |
| efflux rnd transporter periplasmic adaptor subunit | LPB072_RS00865 | Not Available | Positive | 175611 - 176840 | 42822.6 |
| abc transporter permease | LPB072_RS00870 | Not Available | Positive | 176848 - 178122 | 45281.9 |
| abc transporter atp-binding protein | LPB072_RS00875 | Not Available | Positive | 178119 - 178820 | 24892.0 |
| duf3237 domain-containing protein | LPB072_RS00880 | Not Available | Negative | 178836 - 179288 | 16444.8 |
| fumarylacetoacetase | LPB072_RS00885 | Not Available | Negative | 179335 - 180660 | 47500.5 |
| cyclase family protein | LPB072_RS00890 | Not Available | Negative | 181287 - 182084 | 29590.9 |
| carboxymuconolactone decarboxylase family protein | LPB072_RS00895 | Not Available | Negative | 182104 - 182694 | 21135.4 |
| smp-30/gluconolactonase/lre family protein | LPB072_RS00900 | Not Available | Negative | 182741 - 183793 | 37771.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
